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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
8556

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRPS1 HGNC:12340 (HGNC)
7227 (Entrez Gene)
604386 (OMIM)
Chr8 q24.12 Chr8:115408496-115669028 (-)
GRCh38
Trichorhinophalangeal Syndrome, Type I; TRPS1
Trichorhinophalangeal Syndrome, Type III; TRPS3
Q9UHF7 (UniProt | EBI)
NM_014112 (RefSeq)
mouse Trps1 MGI:1927616 (MGI)
83925 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 19.18 cM Chr15:50654752-50890463 (-)
GRCm38
Trichorhinophalangeal Syndrome, Type I; TRPS1
OTTMUSG00000044609 (VEGA)
OTTMUSP00000065622 (VEGA)
OTTMUST00000117348 (VEGA)
rat Trps1 299897 (Entrez Gene)
Chr7 q31 NP_001128309 (RefSeq)
NM_001134837 (RefSeq)
chimpanzee TRPS1 472846 (Entrez Gene)
Chr8 XP_001137364 (RefSeq)
rhesus macaque TRPS1 700383 (Entrez Gene)
Chr8 XP_001092834 (RefSeq)
cattle TRPS1 537652 (Entrez Gene)
Chr14 NP_001179842 (RefSeq)
NM_001192913 (RefSeq)
dog TRPS1 482018 (Entrez Gene)
Chr13 XP_539139 (RefSeq)
chicken TRPS1 420289 (Entrez Gene)
Chr2 XP_418402 (RefSeq)
zebrafish trps1 795613 (Entrez Gene)
Chr19 NP_001171405 (RefSeq)
NM_001177934 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory