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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human FOXP3 HGNC:6106 (HGNC)
50943 (Entrez Gene)
300292 (OMIM)
HGNC homology
ChrX p11.23 ChrX:49250436-49269727 (-)
Diabetes Mellitus, Insulin-Dependent; IDDM
Immunodysregulation, Polyendocrinopathy, and Enteropathy, X-Linked;
Q9BZS1 (UniProt | EBI)
NM_014009 (RefSeq)
mouse Foxp3 MGI:1891436 (MGI)
20371 (Entrez Gene)
Gene Tree
HGNC homology
ChrX 3.41 cM ChrX:7579676-7595243 (+)
Ichthyosis and Male Hypogonadism
Immunodysregulation, Polyendocrinopathy, and Enteropathy, X-Linked;
Wiskott-Aldrich Syndrome; WAS
OTTMUSG00000016624 (VEGA)
OTTMUSP00000017952 (VEGA)
OTTMUST00000040205 (VEGA)
rat Foxp3 317382 (Entrez Gene)
ChrX q13 NP_001101720 (RefSeq)
NM_001108250 (RefSeq)
rhesus macaque FOXP3 574303 (Entrez Gene)
ChrX NP_001028090 (RefSeq)
NM_001032918 (RefSeq)
cattle FOXP3 506053 (Entrez Gene)
ChrX NP_001039398 (RefSeq)
NM_001045933 (RefSeq)
dog FOXP3 491876 (Entrez Gene)
ChrX NP_001161933 (RefSeq)
NM_001168461 (RefSeq)
western clawed frog foxp3 100485747 (Entrez Gene)
ChrUN XP_012825183 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.0
The Jackson Laboratory