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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
84384

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PRKCH HGNC:9403 (HGNC)
5583 (Entrez Gene)
605437 (OMIM)
Chr14 q23.1 Chr14:61321797-61550980 (+)
GRCh38
Stroke, Ischemic
P24723 (UniProt | EBI)
NM_006255 (RefSeq)
mouse Prkch MGI:97600 (MGI)
18755 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 30.81 cM Chr12:73584797-73778185 (+)
GRCm38
OTTMUSG00000029341 (VEGA)
OTTMUSP00000037480 (VEGA)
OTTMUST00000072699 (VEGA)
rat Prkch 81749 (Entrez Gene)
Chr6 q24 Q64617 (UniProt | EBI)
NM_031085 (RefSeq)
chimpanzee PRKCH 746068 (Entrez Gene)
Chr14 XP_001168420 (RefSeq)
rhesus macaque PRKCH 704356 (Entrez Gene)
Chr7 XP_002805131 (RefSeq)
cattle PRKCH 518542 (Entrez Gene)
Chr10 NP_001070331 (RefSeq)
NM_001076863 (RefSeq)
dog PRKCH 490722 (Entrez Gene)
Chr8 XP_547844 (RefSeq)
chicken PRKCH 423518 (Entrez Gene)
Chr5 XP_421417 (RefSeq)
western clawed frog prkch 100151731 (Entrez Gene)
ChrUN XP_002939521 (RefSeq)
zebrafish prkcha 100144561 (Entrez Gene)
Chr13 NP_001116528 (RefSeq)
NM_001123056 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory