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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
8411

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COG1 HGNC:6545 (HGNC)
9382 (Entrez Gene)
606973 (OMIM)
Chr17 q25.1 Chr17:73193034-73208507 (+)
GRCh38
Congenital Disorder of Glycosylation, Type Iig; CDG2G
Q8WTW3 (UniProt | EBI)
NM_018714 (RefSeq)
mouse Cog1 MGI:1333873 (MGI)
16834 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 79.1 cM Chr11:113649169-113667054 (+)
GRCm38
OTTMUSG00000003397 (VEGA)
OTTMUSP00000003398 (VEGA)
OTTMUST00000007130 (VEGA)
rat Cog1 303652 (Entrez Gene)
Chr10 q32.1 NP_001100532 (RefSeq)
NM_001107062 (RefSeq)
chimpanzee COG1 454856 (Entrez Gene)
Chr17 XP_003315750 (RefSeq)
rhesus macaque COG1 695754 (Entrez Gene)
Chr16 NP_001253291 (RefSeq)
NM_001266362 (RefSeq)
cattle COG1 515788 (Entrez Gene)
Chr19 NP_001179356 (RefSeq)
NM_001192427 (RefSeq)
dog COG1 483282 (Entrez Gene)
Chr9 XP_005624227 (RefSeq)
chicken COG1 417449 (Entrez Gene)
Chr18 NP_001025878 (RefSeq)
NM_001030707 (RefSeq)
western clawed frog cog1 100497164 (Entrez Gene)
ChrUN XP_002935935 (RefSeq)
zebrafish cog1 100334475 (Entrez Gene)
Chr3 XP_002661206 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory