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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
8346

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GMPPA HGNC:22923 (HGNC)
29926 (Entrez Gene)
615495 (OMIM)
Chr2 q35 Chr2:219498865-219506996 (+)
GRCh38
Alacrima, Achalasia, and Mental Retardation Syndrome; AAMR
Q96IJ6 (UniProt | EBI)
NM_013335 (RefSeq)
mouse Gmppa MGI:1916330 (MGI)
69080 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 39.04 cM Chr1:75435930-75443179 (+)
GRCm38
OTTMUSG00000019424 (VEGA)
OTTMUSP00000020929 (VEGA)
OTTMUST00000046364 (VEGA)
rat Gmppa 501167 (Entrez Gene)
Chr9 q33 Q5XIC1 (UniProt | EBI)
NM_001025056 (RefSeq)
chimpanzee GMPPA 459966 (Entrez Gene)
Chr2B XP_516110 (RefSeq)
rhesus macaque GMPPA 703756 (Entrez Gene)
Chr12 NP_001244453 (RefSeq)
NM_001257524 (RefSeq)
cattle GMPPA 504889 (Entrez Gene)
Chr2 NP_001193104 (RefSeq)
NM_001206175 (RefSeq)
dog GMPPA 608751 (Entrez Gene)
Chr37 XP_851514 (RefSeq)
chicken GMPPA 769292 (Entrez Gene)
Chr7 XP_001232537 (RefSeq)
zebrafish gmppaa 431743 (Entrez Gene)
Chr9 Q6GMK8 (UniProt | EBI)
NM_001002196 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory