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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
83326

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LOC101928761 101928761 (Entrez Gene)
ChrX
mouse H2al1a MGI:3714114 (MGI)
100042922 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 6.03 cM ChrX:11299257-11299757 (+)
GRCm38
100042922 (NCBI Gene Model)
Q5M8Q2 (UniProt | EBI)
NM_001111037 (RefSeq)
H2al1b MGI:3650131 (MGI)
100042927 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 6.03 cM ChrX:11302432-11302921 (+)
GRCm38
100042927 (NCBI Gene Model)
NP_001229876 (RefSeq)
NM_001242947 (RefSeq)
H2al1c MGI:3711280 (MGI)
100042929 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 6.04 cM ChrX:11305655-11305972 (+)
GRCm38
100042929 (NCBI Gene Model)
Q5M8Q2 (UniProt | EBI)
NM_001242949 (RefSeq)
H2al1d MGI:3710419 (MGI)
100042931 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 6.04 cM ChrX:11308824-11309141 (+)
GRCm38
100042931 (NCBI Gene Model)
Q5M8Q2 (UniProt | EBI)
NM_001242950 (RefSeq)
H2al1e MGI:3649617 (MGI)
547160 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 6.04 cM ChrX:11311934-11312427 (+)
GRCm38
547160 (NCBI Gene Model)
NP_001020431 (RefSeq)
NM_001025260 (RefSeq)
H2al1f MGI:3649874 (MGI)
100042939 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 6.05 cM ChrX:11315158-11315475 (+)
GRCm38
100042939 (NCBI Gene Model)
Q5M8Q2 (UniProt | EBI)
NM_001242951 (RefSeq)
H2al1g MGI:3710577 (MGI)
100042943 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 6.05 cM ChrX:11318256-11318764 (+)
GRCm38
100042943 (NCBI Gene Model)
Q5M8Q2 (UniProt | EBI)
NM_001242952 (RefSeq)
H2al1h MGI:3711282 (MGI)
100042944 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 6.06 cM ChrX:11321492-11321809 (+)
GRCm38
ENSMUSG00000099443 (Ensembl Gene Model)
ENSMUSP00000136794 (Ensembl)
ENSMUST00000177926 (Ensembl)
H2al1i MGI:3710416 (MGI)
100042946 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 6.06 cM ChrX:11324659-11324976 (+)
GRCm38
100042946 (NCBI Gene Model)
Q5M8Q2 (UniProt | EBI)
NM_001242954 (RefSeq)
H2al1j MGI:3643273 (MGI)
236663 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 6.06 cM ChrX:11327822-11328151 (+)
GRCm38
236663 (NCBI Gene Model)
NP_001108001 (RefSeq)
NM_001114529 (RefSeq)
H2al1k MGI:3710586 (MGI)
547154 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 4.26 cM ChrX:9350627-9351136 (+)
GRCm38
ENSMUSG00000100448 (Ensembl Gene Model)
ENSMUSP00000137043 (Ensembl)
ENSMUST00000178196 (Ensembl)
H2al1m MGI:1923633 (MGI)
76383 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 4.22 cM ChrX:9283764-9284288 (+)
GRCm38
76383 (NCBI Gene Model)
NP_083864 (RefSeq)
NM_029588 (RefSeq)
H2al1n MGI:3643774 (MGI)
385328 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 9.18 cM ChrX:14211148-14211657 (+)
GRCm38
385328 (NCBI Gene Model)
NP_001029272 (RefSeq)
NM_001034100 (RefSeq)
H2al1o MGI:3643069 (MGI)
333452 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 4.37 cM ChrX:9571960-9572391 (-)
GRCm38
333452 (NCBI Gene Model)
NP_001078986 (RefSeq)
NM_001085517 (RefSeq)
H2al2a MGI:1915481 (MGI)
68231 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 12.81 cM Chr2:17996417-17996958 (-)
GRCm38
68231 (NCBI Gene Model)
Q9CQ70 (UniProt | EBI)
NM_026627 (RefSeq)
H2al2b MGI:3710623 (MGI)
100042840 (Entrez Gene)
Gene Tree
VISTA-Point
ChrY Syntenic ChrY:2720339-2720674 (-)
GRCm38
100042840 (NCBI Gene Model)
NP_001106866 (RefSeq)
NM_001113395 (RefSeq)
H2al2c MGI:3779546 (MGI)
547210 (Entrez Gene)
Gene Tree
VISTA-Point
ChrY Syntenic ChrY:2599099-2599434 (+)
GRCm38
547210 (NCBI Gene Model)
NP_001171040 (RefSeq)
NM_001177569 (RefSeq)
rat LOC100363171 100363171 (Entrez Gene)
ChrX XP_002730244 (RefSeq)
cattle LOC523631 523631 (Entrez Gene)
ChrX NP_001071426 (RefSeq)
NM_001077958 (RefSeq)
LOC617633 617633 (Entrez Gene)
ChrX XP_003588236 (RefSeq)
dog LOC491818 491818 (Entrez Gene)
ChrX XP_548938 (RefSeq)
LOC491827 491827 (Entrez Gene)
ChrX XP_548947 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory