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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
8271

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HMMR HGNC:5012 (HGNC)
3161 (Entrez Gene)
600936 (OMIM)
Chr5 q34 Chr5:163460511-163491945 (+)
GRCh38
Breast Cancer
O75330 (UniProt | EBI)
NM_012484 (RefSeq)
mouse Hmmr MGI:104667 (MGI)
15366 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 24.4 cM Chr11:40701395-40733422 (-)
GRCm38
OTTMUSG00000005436 (VEGA)
OTTMUSP00000005604 (VEGA)
OTTMUST00000012114 (VEGA)
rat Hmmr 25460 (Entrez Gene)
Chr10 q12 P97779 (UniProt | EBI)
NM_012964 (RefSeq)
chimpanzee HMMR 737973 (Entrez Gene)
Chr5 XP_001145921 (RefSeq)
rhesus macaque HMMR 697991 (Entrez Gene)
Chr6 XP_001088518 (RefSeq)
cattle HMMR 281227 (Entrez Gene)
Chr7 NP_001193550 (RefSeq)
NM_001206621 (RefSeq)
dog HMMR 611838 (Entrez Gene)
Chr4 XP_854651 (RefSeq)
chicken HMMR 416163 (Entrez Gene)
Chr13 XP_414495 (RefSeq)
western clawed frog hmmr 779567 (Entrez Gene)
ChrUN XP_002935941 (RefSeq)
zebrafish hmmr 322012 (Entrez Gene)
Chr14 NP_955874 (RefSeq)
NM_199580 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/21/2014
MGI 5.20
The Jackson Laboratory