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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
82612

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SMIM20 HGNC:37260 (HGNC)
389203 (Entrez Gene)
617465 (OMIM)
SMIM20 (gene) (MyGene.info)
HGNC homology
Chr4 p15.2 Chr4:25914192-25929879 (+)
GRCh38.p7
Q8N5G0 (UniProt | EBI)
NM_001145432 (RefSeq)
mouse Smim20 MGI:1913528 (MGI)
66278 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr5 29.05 cM Chr5:53267106-53278540 (+)
GRCm38
66278 (NCBI Gene Model)
D3Z7Q2 (UniProt | EBI)
NM_001145433 (RefSeq)
rat Smim20 501923 (Entrez Gene)
Chr14 q11 C0HLM6 (UniProt | EBI)
NM_001134639 (RefSeq)
chimpanzee SMIM20 750881 (Entrez Gene)
Chr4 XP_024211794 (RefSeq)
cattle SMIM20 615093 (Entrez Gene)
Chr6 F1MDB2 (UniProt | EBI)
NM_001145428 (RefSeq)
dog SMIM20 611690 (Entrez Gene)
Chr3 NP_001138901 (RefSeq)
NM_001145429 (RefSeq)
chicken SMIM20 769392 (Entrez Gene)
Chr4 NP_001138902 (RefSeq)
NM_001145430 (RefSeq)
frog, western clawed smim20 100491963 (Entrez Gene)
Chr1 XP_002939144 (RefSeq)
macaque, rhesus SMIM20 695372 (Entrez Gene)
Chr5 XP_014993590 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/23/2021
MGI 6.16
The Jackson Laboratory