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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
820

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SSTR1 HGNC:11330 (HGNC)
6751 (Entrez Gene)
182451 (OMIM)
Chr14 q13 Chr14:38207999-38213063 (+)
GRCh38
P30872 (UniProt | EBI)
NM_001049 (RefSeq)
mouse Sstr1 MGI:98327 (MGI)
20605 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 25.61 cM Chr12:58211772-58213887 (+)
GRCm38
OTTMUSG00000037022 (VEGA)
OTTMUSP00000053112 (VEGA)
OTTMUST00000095213 (VEGA)
rat Sstr1 25033 (Entrez Gene)
Chr6 q23 P28646 (UniProt | EBI)
NM_012719 (RefSeq)
chimpanzee SSTR1 467434 (Entrez Gene)
Chr14 XP_522831 (RefSeq)
rhesus macaque SSTR1 698123 (Entrez Gene)
Chr7 XP_001091429 (RefSeq)
cattle SSTR1 540013 (Entrez Gene)
Chr21 NP_001025492 (RefSeq)
NM_001030321 (RefSeq)
dog SSTR1 403455 (Entrez Gene)
Chr8 Q49LX5 (UniProt | EBI)
NM_001031816 (RefSeq)
chicken SSTR1 771648 (Entrez Gene)
Chr5 NP_001106638 (RefSeq)
NM_001113167 (RefSeq)
western clawed frog sstr1 100485629 (Entrez Gene)
ChrUN XP_004917297 (RefSeq)
zebrafish sstr1a 568254 (Entrez Gene)
Chr17 XP_696666 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory