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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
8199

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC39A6 HGNC:18607 (HGNC)
25800 (Entrez Gene)
608731 (OMIM)
SLC39A6 (MyGene.info)
HGNC homology
Chr18 q12.2 Chr18:36108531-36129814 (-)
GRCh38.p7
Q13433 (UniProt | EBI)
NM_012319 (RefSeq)
mouse Slc39a6 MGI:2147279 (MGI)
106957 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr18 13.18 cM Chr18:24579881-24603817 (-)
GRCm38
106957 (NCBI Gene Model)
Q8C145 (UniProt | EBI)
NM_139143 (RefSeq)
rat Slc39a6 291733 (Entrez Gene)
Chr18 p12 Q4V887 (UniProt | EBI)
NM_001024745 (RefSeq)
chimpanzee SLC39A6 468523 (Entrez Gene)
Chr18 XP_523912 (RefSeq)
cattle SLC39A6 524456 (Entrez Gene)
Chr24 NP_001137564 (RefSeq)
NM_001144092 (RefSeq)
dog SLC39A6 480159 (Entrez Gene)
Chr7 NP_001274084 (RefSeq)
NM_001287155 (RefSeq)
chicken SLC39A6 420984 (Entrez Gene)
Chr2 XP_015137886 (RefSeq)
zebrafish slc39a6 324303 (Entrez Gene)
Chr2 NP_001001591 (RefSeq)
NM_001001591 (RefSeq)
frog, western clawed slc39a6 100487349 (Entrez Gene)
Chr6 XP_002935324 (RefSeq)
macaque, rhesus SLC39A6 709313 (Entrez Gene)
Chr18 XP_014977328 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory