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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
816

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC6A2 HGNC:11048 (HGNC)
6530 (Entrez Gene)
163970 (OMIM)
Chr16 q12.2 Chr16:55655630-55706192 (+)
GRCh38
Orthostatic Intolerance
P23975 (UniProt | EBI)
NM_001043 (RefSeq)
mouse Slc6a2 MGI:1270850 (MGI)
20538 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 44.99 cM Chr8:92961047-93001667 (+)
GRCm38
20538 (NCBI Gene Model)
O55192 (UniProt | EBI)
NM_009209 (RefSeq)
rat Slc6a2 83511 (Entrez Gene)
Chr19 p11 NP_112633 (RefSeq)
NM_031343 (RefSeq)
chimpanzee SLC6A2 454096 (Entrez Gene)
Chr16 XP_001167725 (RefSeq)
rhesus macaque SLC6A2 613238 (Entrez Gene)
Chr20 NP_001028194 (RefSeq)
NM_001033022 (RefSeq)
dog SLC6A2 487272 (Entrez Gene)
Chr2 NP_001129974 (RefSeq)
NM_001136502 (RefSeq)
chicken SLC6A2 395458 (Entrez Gene)
Chr11 NP_990047 (RefSeq)
NM_204716 (RefSeq)
western clawed frog slc6a2 100486589 (Entrez Gene)
ChrUN XP_002939272 (RefSeq)
zebrafish LOC565776 565776 (Entrez Gene)
Chr7 XP_694138 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory