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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
8140

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human FOXI1 HGNC:3815 (HGNC)
2299 (Entrez Gene)
601093 (OMIM)
Chr5 q34 Chr5:170105913-170109725 (+)
GRCh38
Deafness, Autosomal Recessive 4, with Enlarged Vestibular Aqueduct;
Pendred Syndrome; PDS
Q12951 (UniProt | EBI)
NM_012188 (RefSeq)
mouse Foxi1 MGI:1096329 (MGI)
14233 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 19.65 cM Chr11:34204338-34208089 (-)
GRCm38
Pendred Syndrome; PDS
OTTMUSG00000005407 (VEGA)
OTTMUSP00000005586 (VEGA)
OTTMUST00000012053 (VEGA)
rat Foxi1 287185 (Entrez Gene)
Chr10 q12 NP_001099246 (RefSeq)
NM_001105776 (RefSeq)
chimpanzee FOXI1 471732 (Entrez Gene)
Chr5 XP_001149320 (RefSeq)
rhesus macaque FOXI1 700122 (Entrez Gene)
Chr6 XP_001092246 (RefSeq)
cattle FOXI1 539442 (Entrez Gene)
Chr20 NP_001179172 (RefSeq)
NM_001192243 (RefSeq)
dog FOXI1 489127 (Entrez Gene)
Chr4 XP_546245 (RefSeq)
chicken FOXI1 427613 (Entrez Gene)
Chr13 XP_425185 (RefSeq)
western clawed frog foxi1 394546 (Entrez Gene)
ChrUN Q6P8A3 (UniProt | EBI)
NM_203618 (RefSeq)
zebrafish foxi3a 387257 (Entrez Gene)
Chr21 NP_944599 (RefSeq)
NM_198917 (RefSeq)
foxi3b 387258 (Entrez Gene)
Chr14 NP_944600 (RefSeq)
NM_198918 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory