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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
8041

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SCN11A HGNC:10583 (HGNC)
11280 (Entrez Gene)
604385 (OMIM)
Chr3 p22.2 Chr3:38845769-38953651 (-)
GRCh38
Episodic Pain Syndrome, Familial, 3; FEPS3
Neuropathy, Hereditary Sensory and Autonomic, Type VII; HSAN7
Q9UI33 (UniProt | EBI)
NM_014139 (RefSeq)
mouse Scn11a MGI:1345149 (MGI)
24046 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 71.33 cM Chr9:119753763-119825456 (-)
GRCm38
Neuropathy, Hereditary Sensory and Autonomic, Type VII; HSAN7
24046 (NCBI Gene Model)
Q9R053 (UniProt | EBI)
NM_011887 (RefSeq)
rat Scn11a 29701 (Entrez Gene)
Chr8 q32 O88457 (UniProt | EBI)
NM_019265 (RefSeq)
chimpanzee SCN11A 460275 (Entrez Gene)
Chr3 XP_003309747 (RefSeq)
rhesus macaque SCN11A 695258 (Entrez Gene)
Chr2 XP_001083888 (RefSeq)
cattle SCN11A 535956 (Entrez Gene)
Chr22 XP_002696965 (RefSeq)
NM_001192868 (RefSeq)
dog SCN11A 485593 (Entrez Gene)
Chr23 XP_542712 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory