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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SCN11A HGNC:10583 (HGNC)
11280 (Entrez Gene)
604385 (OMIM)
Nav1.9 (MyGene.info)
HGNC homology
Chr3 p22.2 Chr3:38845764-39051986 (-)
familial episodic pain syndrome 3
hereditary sensory and autonomic neuropathy type 7
Q9UI33 (UniProt | EBI)
NM_014139 (RefSeq)
mouse Scn11a MGI:1345149 (MGI)
24046 (Entrez Gene)
Gene Tree
HGNC homology
Chr9 71.33 cM Chr9:119753763-119825456 (-)
hereditary sensory neuropathy
24046 (NCBI Gene Model)
Q9R053 (UniProt | EBI)
NM_011887 (RefSeq)
rat Scn11a 29701 (Entrez Gene)
Chr8 q32 O88457 (UniProt | EBI)
NM_019265 (RefSeq)
chimpanzee SCN11A 460275 (Entrez Gene)
Chr3 XP_016796236 (RefSeq)
cattle SCN11A 535956 (Entrez Gene)
Chr22 XP_015314976 (RefSeq)
NM_001192868 (RefSeq)
dog SCN11A 485593 (Entrez Gene)
Chr23 XP_013962272 (RefSeq)
macaque, rhesus SCN11A 695258 (Entrez Gene)
Chr2 XP_014986816 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.15
The Jackson Laboratory