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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SHOC1 HGNC:26535 (HGNC)
158401 (Entrez Gene)
618038 (OMIM)
HGNC homology
Chr9 q31.3 Chr9:111686175-111795949 (-)
Q5VXU9 (UniProt | EBI)
NM_173521 (RefSeq)
mouse Shoc1 MGI:2140313 (MGI)
100155 (Entrez Gene)
Gene Tree
HGNC homology
Chr4 32.36 cM Chr4:59041984-59113971 (-)
100155 (NCBI Gene Model)
A2ALV5 (UniProt | EBI)
NM_001370843 (RefSeq)
rat Shoc1 686050 (Entrez Gene)
Chr5 q24 XP_017458501 (RefSeq)
chimpanzee SHOC1 464659 (Entrez Gene)
Chr9 XP_016816914 (RefSeq)
cattle SHOC1 617568 (Entrez Gene)
Chr8 XP_015328169 (RefSeq)
dog SHOC1 100687399 (Entrez Gene)
Chr11 XP_022280645 (RefSeq)
chicken C9orf84 101747858 (Entrez Gene)
ChrZ XP_025000888 (RefSeq)
frog, western clawed LOC100487050 100487050 (Entrez Gene)
macaque, rhesus SHOC1 707991 (Entrez Gene)
Chr15 NP_001181234 (RefSeq)
NM_001194305 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.14
The Jackson Laboratory