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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7965

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SDC3 HGNC:10660 (HGNC)
9672 (Entrez Gene)
186357 (OMIM)
Chr1 p35.2 Chr1:30869466-30908633 (-)
GRCh38
Obesity
O75056 (UniProt | EBI)
NM_014654 (RefSeq)
mouse Sdc3 MGI:1349163 (MGI)
20970 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 63.63 cM Chr4:130792537-130826319 (+)
GRCm38
OTTMUSG00000009594 (VEGA)
OTTMUSP00000010039 (VEGA)
OTTMUST00000022034 (VEGA)
rat Sdc3 116673 (Entrez Gene)
Chr5 q36 P33671 (UniProt | EBI)
NM_053893 (RefSeq)
chimpanzee SDC3 744364 (Entrez Gene)
Chr1 XP_001149044 (RefSeq)
rhesus macaque SDC3 704374 (Entrez Gene)
Chr1 XP_001092729 (RefSeq)
cattle SDC3 618198 (Entrez Gene)
Chr2 NP_001193460 (RefSeq)
NM_001206531 (RefSeq)
dog SDC3 487323 (Entrez Gene)
Chr2 XP_005617740 (RefSeq)
chicken SDC3 396343 (Entrez Gene)
Chr23 P26261 (UniProt | EBI)
NM_205383 (RefSeq)
western clawed frog sdc3 100134998 (Entrez Gene)
ChrUN XP_002938874 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory