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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SHC1 HGNC:10840 (HGNC)
6464 (Entrez Gene)
600560 (OMIM)
SHC1 (MyGene.info)
HGNC homology
Chr1 q21.3 Chr1:154962298-154974492 (-)
P29353 (UniProt | EBI)
NM_183001 (RefSeq)
mouse Shc1 MGI:98296 (MGI)
20416 (Entrez Gene)
Gene Tree
HGNC homology
Chr3 39.11 cM Chr3:89418443-89430015 (+)
OTTMUSG00000022071 (VEGA)
OTTMUSP00000024848 (VEGA)
OTTMUST00000052404 (VEGA)
rat Shc1 85385 (Entrez Gene)
Chr2 q34 Q5M824 (UniProt | EBI)
NM_053517 (RefSeq)
chimpanzee SHC1 457351 (Entrez Gene)
Chr1 XP_009431127 (RefSeq)
cattle SHC1 507196 (Entrez Gene)
Chr3 Q0IIE2 (UniProt | EBI)
NM_001075305 (RefSeq)
dog SHC1 490439 (Entrez Gene)
Chr7 XP_547561 (RefSeq)
chicken SHC1 395934 (Entrez Gene)
Chr25 NP_001280209 (RefSeq)
NM_001293280 (RefSeq)
zebrafish shc1 323818 (Entrez Gene)
Chr16 XP_017206983 (RefSeq)
frog, western clawed shc1 100492349 (Entrez Gene)
macaque, rhesus SHC1 718982 (Entrez Gene)
Chr1 NP_001248416 (RefSeq)
NM_001261487 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory