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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7931

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SEMA6C HGNC:10740 (HGNC)
10500 (Entrez Gene)
609294 (OMIM)
Chr1 q21.2 Chr1:151131685-151146670 (-)
GRCh38
Q9H3T2 (UniProt | EBI)
NM_030913 (RefSeq)
mouse Sema6c MGI:1338032 (MGI)
20360 (Entrez Gene)
Gene Tree
VISTA-Point
Chr3 40.74 cM Chr3:95160457-95174024 (+)
GRCm38
OTTMUSG00000022286 (VEGA)
OTTMUSP00000025221 (VEGA)
OTTMUST00000053081 (VEGA)
rat Sema6c 29744 (Entrez Gene)
Chr2 q34 Q9WTL3 (UniProt | EBI)
NM_017308 (RefSeq)
chimpanzee SEMA6C 747122 (Entrez Gene)
Chr1 XP_001170512 (RefSeq)
rhesus macaque SEMA6C 709464 (Entrez Gene)
Chr1 NP_001252644 (RefSeq)
NM_001265715 (RefSeq)
cattle SEMA6C 524464 (Entrez Gene)
Chr3 XP_002684117 (RefSeq)
dog SEMA6C 483191 (Entrez Gene)
Chr17 XP_540309 (RefSeq)
chicken LOC100859892 100859892 (Entrez Gene)
Chr25 XP_003642725 (RefSeq)
SEMA6C 100857823 (Entrez Gene)
Chr25 XP_003642743 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory