About   Help   FAQ
Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7927

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human SCN8A HGNC:10596 (HGNC)
6334 (Entrez Gene)
600702 (OMIM)
Chr12 q13 Chr12:51590266-51812864 (+)
GRCh38
Cognitive Impairment with or without Cerebellar Ataxia; CIAT
Epileptic Encephalopathy, Early Infantile, 13; EIEE13
Q9UQD0 (UniProt | EBI)
NM_014191 (RefSeq)
mouse Scn8a MGI:103169 (MGI)
20273 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 56.39 cM Chr15:100936271-101045929 (+)
GRCm38
20273 (NCBI Gene Model)
Q9WTU3 (UniProt | EBI)
NM_001077499 (RefSeq)
rat Scn8a 29710 (Entrez Gene)
Chr7 q36 O88420 (UniProt | EBI)
NM_019266 (RefSeq)
chimpanzee SCN8A 451906 (Entrez Gene)
Chr12 XP_001141985 (RefSeq)
rhesus macaque SCN8A 695972 (Entrez Gene)
Chr11 XP_001090295 (RefSeq)
cattle SCN8A 537277 (Entrez Gene)
Chr5 NP_001180031 (RefSeq)
NM_001193102 (RefSeq)
dog SCN8A 477604 (Entrez Gene)
Chr27 XP_850134 (RefSeq)
chicken SCN8A 426869 (Entrez Gene)
ChrLGE22C19 XP_003643160 (RefSeq)
western clawed frog LOC101731347 101731347 (Entrez Gene)
ChrUN XP_004911965 (RefSeq)
zebrafish scn8aa 58152 (Entrez Gene)
Chr23 NP_571703 (RefSeq)
NM_131628 (RefSeq)
scn8ab 793996 (Entrez Gene)
Chr6 NP_001038648 (RefSeq)
NM_001045183 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/19/2014
MGI 5.19
The Jackson Laboratory