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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7896

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PRRX1 HGNC:9142 (HGNC)
5396 (Entrez Gene)
167420 (OMIM)
Chr1 q24 Chr1:170662728-170739400 (+)
GRCh38
Agnathia-Otocephaly Complex; AGOTC
P54821 (UniProt | EBI)
NM_006902 (RefSeq)
mouse Prrx1 MGI:97712 (MGI)
18933 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 70.53 cM Chr1:163245119-163313710 (-)
GRCm38
OTTMUSG00000037738 (VEGA)
OTTMUSP00000054664 (VEGA)
OTTMUST00000097461 (VEGA)
rat Prrx1 266813 (Entrez Gene)
Chr13 q22 P63014 (UniProt | EBI)
NM_153821 (RefSeq)
chimpanzee PRRX1 736677 (Entrez Gene)
Chr1 XP_001141191 (RefSeq)
rhesus macaque PRRX1 702704 (Entrez Gene)
Chr1 XP_001097390 (RefSeq)
cattle PRRX1 540901 (Entrez Gene)
Chr16 NP_001075208 (RefSeq)
NM_001081739 (RefSeq)
dog PRRX1 609105 (Entrez Gene)
Chr7 XP_850725 (RefSeq)
chicken PRRX1 373941 (Entrez Gene)
Chr8 Q05437 (UniProt | EBI)
NM_001007821 (RefSeq)
western clawed frog prrx1 100494324 (Entrez Gene)
ChrUN XP_002933801 (RefSeq)
zebrafish prrx1a 406431 (Entrez Gene)
Chr2 NP_999899 (RefSeq)
NM_214734 (RefSeq)
prrx1b 337089 (Entrez Gene)
Chr20 NP_956344 (RefSeq)
NM_200050 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory