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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
78765

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TMEM200C HGNC:37208 (HGNC)
645369 (Entrez Gene)
HGNC homology
Chr18 p11.31 Chr18:5889412-5898701 (-)
GRCh38.p7
A6NKL6 (UniProt | EBI)
NM_001080209 (RefSeq)
mouse Tmem200c MGI:3646281 (MGI)
622645 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr17 39.36 cM Chr17:68837136-68843138 (+)
GRCm38
622645 (NCBI Gene Model)
NP_001193590 (RefSeq)
NM_001206661 (RefSeq)
rat Tmem200c 501201 (Entrez Gene)
Chr9 q38 NP_001238855 (RefSeq)
NM_001251926 (RefSeq)
chimpanzee TMEM200C 455308 (Entrez Gene)
Chr18 XP_016788831 (RefSeq)
cattle TMEM200C 786855 (Entrez Gene)
Chr24 NP_001193588 (RefSeq)
NM_001206659 (RefSeq)
chicken TMEM200C 421054 (Entrez Gene)
Chr2 XP_004939809 (RefSeq)
frog, western clawed tmem200c 100488313 (Entrez Gene)
Chr6 XP_002938101 (RefSeq)
macaque, rhesus TMEM200C 707565 (Entrez Gene)
Chr18 XP_014977070 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory