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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
7786

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human INVS HGNC:17870 (HGNC)
27130 (Entrez Gene)
243305 (OMIM)
Chr9 q31 Chr9:100099185-100301626 (+)
GRCh38
Nephronophthisis 2; NPHP2
Q9Y283 (UniProt | EBI)
NM_014425 (RefSeq)
mouse Invs MGI:1335082 (MGI)
16348 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 26.11 cM Chr4:48279760-48431954 (+)
GRCm38
Nephronophthisis 2; NPHP2
Tetralogy of Fallot; TOF
OTTMUSG00000006844 (VEGA)
OTTMUSP00000007271 (VEGA)
OTTMUST00000015833 (VEGA)
rat Invs 313228 (Entrez Gene)
Chr5 q22 NP_001101402 (RefSeq)
NM_001107932 (RefSeq)
chimpanzee INVS 473146 (Entrez Gene)
Chr9 XP_001160099 (RefSeq)
rhesus macaque INVS 714490 (Entrez Gene)
Chr15 XP_001111927 (RefSeq)
cattle INVS 529698 (Entrez Gene)
Chr8 NP_001071451 (RefSeq)
NM_001077983 (RefSeq)
dog INVS 442950 (Entrez Gene)
Chr11 Q6JAN1 (UniProt | EBI)
NM_001003361 (RefSeq)
chicken INVS 395234 (Entrez Gene)
Chr2 Q8UVC3 (UniProt | EBI)
NM_204551 (RefSeq)
zebrafish invs 245946 (Entrez Gene)
Chr16 Q8UVC1 (UniProt | EBI)
NM_152970 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory