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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7683

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human DCX HGNC:2714 (HGNC)
1641 (Entrez Gene)
300121 (OMIM)
Doublecortin (MyGene.info)
HGNC homology
ChrX q23 ChrX:111293779-111412232 (-)
GRCh38.p7
lissencephaly
O43602 (UniProt | EBI)
NM_001195553 (RefSeq)
mouse Dcx MGI:1277171 (MGI)
13193 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
ChrX 64.89 cM ChrX:143855842-143933311 (-)
GRCm38
lissencephaly
OTTMUSG00000018842 (VEGA)
OTTMUSP00000020394 (VEGA)
OTTMUST00000045335 (VEGA)
rat Dcx 84394 (Entrez Gene)
ChrX q33-q34 Q9ESI7 (UniProt | EBI)
NM_053379 (RefSeq)
chimpanzee DCX 473733 (Entrez Gene)
ChrX XP_003317681 (RefSeq)
cattle DCX 787968 (Entrez Gene)
ChrX NP_001193894 (RefSeq)
NM_001206965 (RefSeq)
dog DCX 612950 (Entrez Gene)
ChrX XP_022271525 (RefSeq)
chicken DCX 374242 (Entrez Gene)
Chr4 NP_001292603 (RefSeq)
NM_001305674 (RefSeq)
frog, western clawed dcx 100493401 (Entrez Gene)
Chr8 XP_004916905 (RefSeq)
macaque, rhesus DCX 706556 (Entrez Gene)
ChrX XP_014983514 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/13/2017
MGI 6.11
The Jackson Laboratory