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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7659

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RB1CC1 HGNC:15574 (HGNC)
9821 (Entrez Gene)
606837 (OMIM)
HGNC homology
Chr8 q11 Chr8:52622458-52714466 (-)
GRCh38.p2
Breast Cancer
Q8TDY2 (UniProt | EBI)
NM_014781 (RefSeq)
mouse Rb1cc1 MGI:1341850 (MGI)
12421 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr1 1.89 cM Chr1:6206197-6276648 (+)
GRCm38
OTTMUSG00000033467 (VEGA)
OTTMUSP00000045266 (VEGA)
OTTMUST00000084091 (VEGA)
rat Rb1cc1 312927 (Entrez Gene)
Chr5 q12 NP_001101371 (RefSeq)
NM_001107901 (RefSeq)
chimpanzee RB1CC1 464173 (Entrez Gene)
Chr8 XP_009453660 (RefSeq)
rhesus macaque RB1CC1 710330 (Entrez Gene)
Chr8 NP_001253073 (RefSeq)
NM_001266144 (RefSeq)
cattle RB1CC1 539858 (Entrez Gene)
Chr14 NP_001107627 (RefSeq)
NM_001114155 (RefSeq)
dog RB1CC1 477876 (Entrez Gene)
Chr29 XP_005638030 (RefSeq)
chicken RB1CC1 421116 (Entrez Gene)
Chr2 XP_004939912 (RefSeq)
NM_001031020 (RefSeq)
western clawed frog rb1cc1 100127640 (Entrez Gene)
ChrUN XP_012820742 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory