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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7654

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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mouse Casp12 MGI:1312922 (MGI)
12364 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 2.46 cM Chr9:5345430-5373032 (+)
GRCm38
OTTMUSG00000033710 (VEGA)
OTTMUSP00000045800 (VEGA)
OTTMUST00000084913 (VEGA)
rat Casp12 156117 (Entrez Gene)
Chr8 q11 Q920D5 (UniProt | EBI)
NM_130422 (RefSeq)
chimpanzee LOC466766 466766 (Entrez Gene)
Chr11 XP_522166 (RefSeq)
rhesus macaque CASP12 724039 (Entrez Gene)
Chr14 Q153Z0 (UniProt | EBI)
NM_001042431 (RefSeq)
dog CASP12 479458 (Entrez Gene)
Chr5 Q075B4 (UniProt | EBI)
NM_001077236 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory