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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7594

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VCL HGNC:12665 (HGNC)
7414 (Entrez Gene)
193065 (OMIM)
Chr10 q22.2 Chr10:73998078-74120160 (+)
GRCh38
Cardiomyopathy, Dilated, 1w; CMD1W
Cardiomyopathy, Familial Hypertrophic, 15; CMH15
P18206 (UniProt | EBI)
NM_003373 (RefSeq)
mouse Vcl MGI:98927 (MGI)
22330 (Entrez Gene)
Gene Tree
VISTA-Point
Chr14 11.53 cM Chr14:20929433-21033673 (+)
GRCm38
22330 (NCBI Gene Model)
Q64727 (UniProt | EBI)
NM_009502 (RefSeq)
rat Vcl 305679 (Entrez Gene)
Chr15 p16 P85972 (UniProt | EBI)
NM_001107248 (RefSeq)
chimpanzee VCL 450531 (Entrez Gene)
Chr10 XP_001147346 (RefSeq)
rhesus macaque VCL 721921 (Entrez Gene)
Chr9 XP_001118118 (RefSeq)
cattle VCL 783645 (Entrez Gene)
Chr28 NP_001178299 (RefSeq)
NM_001191370 (RefSeq)
dog VCL 479252 (Entrez Gene)
Chr4 XP_536395 (RefSeq)
chicken VCL 396422 (Entrez Gene)
Chr6 P12003 (UniProt | EBI)
NM_205441 (RefSeq)
zebrafish vcla 552980 (Entrez Gene)
Chr13 NP_001122153 (RefSeq)
NM_001128681 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory