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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
75130

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CPA6 HGNC:17245 (HGNC)
57094 (Entrez Gene)
609562 (OMIM)
Chr8 q13.2 Chr8:67422170-67746385 (-)
GRCh38
Epilepsy, Familial Temporal Lobe, 5; ETL5
Febrile Seizures, Familial, 11; FEB11
Q8N4T0 (UniProt | EBI)
NM_020361 (RefSeq)
mouse Cpa6 MGI:3045348 (MGI)
329093 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 2.45 cM Chr1:10324720-10719945 (-)
GRCm38
OTTMUSG00000024232 (VEGA)
OTTMUSP00000028837 (VEGA)
OTTMUST00000059299 (VEGA)
chimpanzee CPA6 472786 (Entrez Gene)
Chr8 XP_528158 (RefSeq)
rhesus macaque CPA6 705117 (Entrez Gene)
Chr8 XP_001098839 (RefSeq)
cattle CPA6 100337371 (Entrez Gene)
Chr14 XP_003583092 (RefSeq)
dog CPA6 486983 (Entrez Gene)
Chr29 XP_544112 (RefSeq)
chicken CPA6 420171 (Entrez Gene)
Chr2 NP_001006344 (RefSeq)
NM_001006344 (RefSeq)
western clawed frog cpa6 100144967 (Entrez Gene)
ChrUN NP_001120005 (RefSeq)
NM_001126533 (RefSeq)
zebrafish LOC100002342 100002342 (Entrez Gene)
Chr24 XP_001342149 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory