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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
75098

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PCDHA6 HGNC:8672 (HGNC)
56142 (Entrez Gene)
606312 (OMIM)
PCDHA6 (MyGene.info)
HGNC homology
Chr5 q31.3 Chr5:140827922-141012344 (+)
GRCh38.p7
Q9UN73 (UniProt | EBI)
NM_031849 (RefSeq)
mouse Pcdha6 MGI:1298367 (MGI)
12937 (Entrez Gene)
Gene Tree
VISTA-Point
Chr18 19.46 cM Chr18:36967631-37187657 (+)
GRCm38
ENSMUSG00000103707 (Ensembl Gene Model)
ENSMUSP00000141587 (Ensembl)
ENSMUST00000193777 (Ensembl)
rat Pcdha6 393088 (Entrez Gene)
Chr18 p11 NP_955800 (RefSeq)
NM_199506 (RefSeq)
chimpanzee PCDHA6 100034713 (Entrez Gene)
Chr5 Q5DRE6 (UniProt | EBI)
NM_001082591 (RefSeq)
cattle PCDHA6 540057 (Entrez Gene)
Chr7 NM_001193098 (RefSeq)
dog PCDHA6 607224 (Entrez Gene)
Chr2
frog, western clawed pcdha8 100490196 (Entrez Gene)
Chr3 XP_002935957 (RefSeq)
macaque, rhesus PCDHA6 698248 (Entrez Gene)
Chr6
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/30/2020
MGI 6.15
The Jackson Laboratory