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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7499

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CAVIN1 HGNC:9688 (HGNC)
284119 (Entrez Gene)
603198 (OMIM)
PTRF (MyGene.info)
HGNC homology
Chr17 q21.2 Chr17:42402449-42423320 (-)
GRCh38.p7
congenital generalized lipodystrophy type 4
Q6NZI2 (UniProt | EBI)
NM_012232 (RefSeq)
mouse Cavin1 MGI:1277968 (MGI)
19285 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 63.95 cM Chr11:100956733-100970887 (-)
GRCm38
congenital generalized lipodystrophy type 4
pulmonary hypertension
ENSMUSG00000004044 (Ensembl Gene Model)
ENSMUSP00000058321 (Ensembl)
ENSMUST00000060792 (Ensembl)
rat Cavin1 287710 (Entrez Gene)
Chr10 q31 P85125 (UniProt | EBI)
NM_001105841 (RefSeq)
chimpanzee CAVIN1 454684 (Entrez Gene)
Chr17 XP_016787274 (RefSeq)
cattle CAVIN1 538457 (Entrez Gene)
Chr19 NP_001104573 (RefSeq)
NM_001081731 (RefSeq)
dog CAVIN1 100855435 (Entrez Gene)
Chr9 XP_003639324 (RefSeq)
chicken CAVIN1 396006 (Entrez Gene)
Chr27 NP_001001471 (RefSeq)
NM_001001471 (RefSeq)
zebrafish cavin1b 561082 (Entrez Gene)
Chr24 NP_001108021 (RefSeq)
NM_001114549 (RefSeq)
frog, western clawed cavin1 448589 (Entrez Gene)
ChrUN NP_001005049 (RefSeq)
NM_001005049 (RefSeq)
macaque, rhesus LOC706570 706570 (Entrez Gene)
Chr16 XP_014975192 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory