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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
74984

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC30A4 HGNC:11015 (HGNC)
7782 (Entrez Gene)
602095 (OMIM)
Chr15 q11.2-q21.3 Chr15:45482478-45522807 (-)
GRCh38
O14863 (UniProt | EBI)
NM_013309 (RefSeq)
mouse Slc30a4 MGI:1345282 (MGI)
22785 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 60.65 cM Chr2:122681233-122702663 (-)
GRCm38
OTTMUSG00000015670 (VEGA)
OTTMUSP00000016681 (VEGA)
OTTMUST00000037230 (VEGA)
rat Slc30a4 64469 (Entrez Gene)
Chr3 q35 O55174 (UniProt | EBI)
NM_172066 (RefSeq)
chimpanzee SLC30A4 453403 (Entrez Gene)
Chr15 XP_510375 (RefSeq)
cattle SLC30A4 540869 (Entrez Gene)
Chr10 XP_613527 (RefSeq)
dog SLC30A4 487539 (Entrez Gene)
Chr30 XP_544664 (RefSeq)
chicken SLC30A4 415444 (Entrez Gene)
Chr10 NP_001280212 (RefSeq)
NM_001293283 (RefSeq)
western clawed frog slc30a4 100124729 (Entrez Gene)
ChrUN NP_001096181 (RefSeq)
NM_001102711 (RefSeq)
zebrafish slc30a4 393616 (Entrez Gene)
Chr18 NP_956937 (RefSeq)
NM_200643 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory