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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
74967

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PCDH10 HGNC:13404 (HGNC)
57575 (Entrez Gene)
608286 (OMIM)
PCDH10 (MyGene.info)
HGNC homology
Chr4 q28.3 Chr4:133149290-133208606 (+)
GRCh38.p7
Q9P2E7 (UniProt | EBI)
NM_020815 (RefSeq)
mouse Pcdh10 MGI:1338042 (MGI)
18526 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr3 20.35 cM Chr3:45378398-45434579 (+)
GRCm38
18526 (NCBI Gene Model)
NP_001091640 (RefSeq)
NM_001098171 (RefSeq)
chimpanzee PCDH10 461488 (Entrez Gene)
Chr4 XP_016807710 (RefSeq)
cattle PCDH10 531875 (Entrez Gene)
Chr17 NP_001178080 (RefSeq)
NM_001191151 (RefSeq)
dog PCDH10 102156925 (Entrez Gene)
Chr19 XP_013976930 (RefSeq)
chicken PCDH10 408048 (Entrez Gene)
Chr4 NP_999837 (RefSeq)
NM_214672 (RefSeq)
zebrafish pcdh10a 259186 (Entrez Gene)
Chr1 NP_997736 (RefSeq)
NM_212571 (RefSeq)
pcdh10b 360138 (Entrez Gene)
Chr14 NP_878305 (RefSeq)
NM_182885 (RefSeq)
frog, western clawed pcdh10 779938 (Entrez Gene)
Chr1 NP_001072483 (RefSeq)
NM_001079015 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory