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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
74915

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TRPC5 HGNC:12337 (HGNC)
7224 (Entrez Gene)
300334 (OMIM)
ChrX q23 ChrX:111774314-112082776 (-)
GRCh38
Q9UL62 (UniProt | EBI)
NM_012471 (RefSeq)
mouse Trpc5 MGI:109524 (MGI)
22067 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 65.49 cM ChrX:144381671-144688180 (-)
GRCm38
OTTMUSG00000018934 (VEGA)
OTTMUSP00000020456 (VEGA)
OTTMUST00000045505 (VEGA)
rat Trpc5 140933 (Entrez Gene)
ChrX q14 NP_543174 (RefSeq)
NM_080898 (RefSeq)
chimpanzee TRPC5 465813 (Entrez Gene)
ChrX XP_009437812 (RefSeq)
rhesus macaque TRPC5 707171 (Entrez Gene)
ChrX XP_001101078 (RefSeq)
cattle TRPC5 407103 (Entrez Gene)
ChrX Q9MYV9 (UniProt | EBI)
NM_001166574 (RefSeq)
dog TRPC5 492072 (Entrez Gene)
ChrX XP_853241 (RefSeq)
chicken TRPC5 422337 (Entrez Gene)
Chr4 XP_420310 (RefSeq)
western clawed frog trpc5 100493720 (Entrez Gene)
ChrUN XP_002938829 (RefSeq)
zebrafish LOC555897 555897 (Entrez Gene)
Chr10
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory