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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7485

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PPARGC1A HGNC:9237 (HGNC)
10891 (Entrez Gene)
604517 (OMIM)
Chr4 p15.1 Chr4:23792021-24091635 (-)
GRCh38
Q9UBK2 (UniProt | EBI)
NM_013261 (RefSeq)
mouse Ppargc1a MGI:1342774 (MGI)
19017 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 27.02 cM Chr5:51454249-51567725 (-)
GRCm38
OTTMUSG00000022759 (VEGA)
OTTMUSP00000026095 (VEGA)
OTTMUST00000054635 (VEGA)
rat Ppargc1a 83516 (Entrez Gene)
Chr14 q11 Q9QYK2 (UniProt | EBI)
NM_031347 (RefSeq)
chimpanzee PPARGC1A 461140 (Entrez Gene)
Chr4 XP_003310319 (RefSeq)
rhesus macaque PPARGC1A 715762 (Entrez Gene)
Chr5 XP_001105289 (RefSeq)
cattle PPARGC1A 338446 (Entrez Gene)
Chr6 Q865B7 (UniProt | EBI)
NM_177945 (RefSeq)
dog PPARGC1A 479127 (Entrez Gene)
Chr3 XP_851741 (RefSeq)
chicken PPARGC1A 422815 (Entrez Gene)
Chr4 NP_001006457 (RefSeq)
NM_001006457 (RefSeq)
western clawed frog ppargc1a 100491667 (Entrez Gene)
ChrUN XP_002936759 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/02/2014
MGI 5.19
The Jackson Laboratory