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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
74841

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CSNK1D HGNC:2452 (HGNC)
1453 (Entrez Gene)
600864 (OMIM)
Chr17 q25 Chr17:82239669-82273718 (-)
GRCh38
Advanced Sleep Phase Syndrome, Familial, 2; FASPS2
P48730 (UniProt | EBI)
NM_001893 (RefSeq)
mouse Csnk1d MGI:1355272 (MGI)
104318 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 84.75 cM Chr11:120961749-120991330 (-)
GRCm38
OTTMUSG00000004159 (VEGA)
OTTMUSP00000004584 (VEGA)
OTTMUST00000009420 (VEGA)
rat Csnk1d 64462 (Entrez Gene)
Chr10 q32.3 Q06486 (UniProt | EBI)
NM_139060 (RefSeq)
chimpanzee CSNK1D 454989 (Entrez Gene)
Chr17 XP_001167815 (RefSeq)
dog CSNK1D 475928 (Entrez Gene)
Chr9 XP_533137 (RefSeq)
chicken CSNK1D 417378 (Entrez Gene)
Chr18 NP_001276817 (RefSeq)
NM_001289888 (RefSeq)
western clawed frog csnk1d 394689 (Entrez Gene)
ChrUN Q6P647 (UniProt | EBI)
NM_203758 (RefSeq)
zebrafish csnk1db 406533 (Entrez Gene)
Chr12 Q6P3K7 (UniProt | EBI)
NM_213250 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory