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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
74542

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CACNA1F HGNC:1393 (HGNC)
778 (Entrez Gene)
300110 (OMIM)
ChrX p11.23 ChrX:49205063-49233371 (-)
GRCh38
Aland Island Eye Disease; AIED
Cone-Rod Dystrophy, X-Linked, 3; CORDX3
Night Blindness, Congenital Stationary, Type 2A; CSNB2A
O60840 (UniProt | EBI)
NM_005183 (RefSeq)
mouse Cacna1f MGI:1859639 (MGI)
54652 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 3.42 cM ChrX:7607083-7635196 (+)
GRCm38
Night Blindness, Congenital Stationary, Type 2A; CSNB2A
OTTMUSG00000017707 (VEGA)
OTTMUSP00000019288 (VEGA)
OTTMUST00000042905 (VEGA)
rat Cacna1f 114493 (Entrez Gene)
ChrX q13 NP_446153 (RefSeq)
NM_053701 (RefSeq)
rhesus macaque CACNA1F 715787 (Entrez Gene)
ChrX XP_001106163 (RefSeq)
cattle CACNA1F 509779 (Entrez Gene)
ChrX NP_001192592 (RefSeq)
NM_001205663 (RefSeq)
dog CACNA1F 480915 (Entrez Gene)
ChrX XP_005642146 (RefSeq)
western clawed frog cacna1f 100485906 (Entrez Gene)
ChrUN XP_002941018 (RefSeq)
zebrafish cacna1f 559964 (Entrez Gene)
Chr8 XP_003199134 (RefSeq)
LOC793708 793708 (Entrez Gene)
Chr8 XP_009302516 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory