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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CACNA1F HGNC:1393 (HGNC)
778 (Entrez Gene)
300110 (OMIM)
HGNC homology
ChrX p11.23 ChrX:49205063-49233671 (-)
Aland Island Eye Disease; AIED
Cone-Rod Dystrophy, X-Linked, 3; CORDX3
Night Blindness, Congenital Stationary, Type 2A; CSNB2A
O60840 (UniProt | EBI)
NM_001256790 (RefSeq)
mouse Cacna1f MGI:1859639 (MGI)
54652 (Entrez Gene)
Gene Tree
HGNC homology
ChrX 3.42 cM ChrX:7607083-7635196 (+)
Night Blindness, Congenital Stationary, Type 2A; CSNB2A
OTTMUSG00000017707 (VEGA)
OTTMUSP00000019288 (VEGA)
OTTMUST00000042905 (VEGA)
rat Cacna1f 114493 (Entrez Gene)
ChrX q13 NP_446153 (RefSeq)
NM_053701 (RefSeq)
rhesus macaque CACNA1F 715787 (Entrez Gene)
ChrX XP_014982895 (RefSeq)
cattle CACNA1F 509779 (Entrez Gene)
ChrX NP_001192592 (RefSeq)
NM_001205663 (RefSeq)
dog CACNA1F 480915 (Entrez Gene)
ChrX XP_005642146 (RefSeq)
western clawed frog cacna1f 100485906 (Entrez Gene)
ChrUN XP_012824181 (RefSeq)
zebrafish cacna1fb 559964 (Entrez Gene)
Chr8 NP_001311425 (RefSeq)
NM_001324496 (RefSeq)
LOC793708 793708 (Entrez Gene)
Chr8 XP_009302516 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.03
The Jackson Laboratory