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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CACNA1F HGNC:1393 (HGNC)
778 (Entrez Gene)
300110 (OMIM)
Cav1.4 (MyGene.info)
HGNC homology
ChrX p11.23 ChrX:49205063-49233404 (-)
Aland Island eye disease
congenital stationary night blindness 2A
X-linked cone-rod dystrophy 3
O60840 (UniProt | EBI)
NM_001256789 (RefSeq)
mouse Cacna1f MGI:1859639 (MGI)
54652 (Entrez Gene)
Gene Tree
HGNC homology
ChrX 3.42 cM ChrX:7607083-7635196 (+)
congenital stationary night blindness 2A
OTTMUSG00000017707 (VEGA)
OTTMUSP00000019288 (VEGA)
OTTMUST00000042905 (VEGA)
rat Cacna1f 114493 (Entrez Gene)
ChrX q12 NP_446153 (RefSeq)
NM_053701 (RefSeq)
cattle CACNA1F 509779 (Entrez Gene)
ChrX NP_001192592 (RefSeq)
NM_001205663 (RefSeq)
dog CACNA1F 480915 (Entrez Gene)
ChrX XP_005642146 (RefSeq)
zebrafish cacna1fa 793708 (Entrez Gene)
Chr8 XP_021334158 (RefSeq)
cacna1fb 559964 (Entrez Gene)
Chr8 NP_001311425 (RefSeq)
NM_001324496 (RefSeq)
frog, western clawed cacna1f 100485906 (Entrez Gene)
Chr8 XP_012824181 (RefSeq)
macaque, rhesus CACNA1F 715787 (Entrez Gene)
ChrX XP_014982895 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory