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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
74460

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SPTA1 HGNC:11272 (HGNC)
6708 (Entrez Gene)
182860 (OMIM)
Chr1 q21 Chr1:158610706-158686716 (-)
GRCh38
Elliptocytosis 2; EL2
Pyropoikilocytosis, Hereditary; HPP
Spherocytosis, Type 3; SPH3
P02549 (UniProt | EBI)
NM_003126 (RefSeq)
mouse Spta1 MGI:98385 (MGI)
20739 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 80.97 cM Chr1:174172776-174248450 (+)
GRCm38
Sickle Cell Anemia
Spherocytosis, Type 1; SPH1
Spherocytosis, Type 3; SPH3
OTTMUSG00000029638 (VEGA)
OTTMUSP00000038061 (VEGA)
OTTMUST00000073524 (VEGA)
rat Spta1 289257 (Entrez Gene)
Chr13 q24 NP_001011908 (RefSeq)
NM_001011908 (RefSeq)
chimpanzee SPTA1 457423 (Entrez Gene)
Chr1 XP_001169940 (RefSeq)
rhesus macaque SPTA1 719111 (Entrez Gene)
Chr1 XP_001117115 (RefSeq)
cattle SPTA1 505122 (Entrez Gene)
Chr3 NP_001193517 (RefSeq)
NM_001206588 (RefSeq)
dog SPTA1 488616 (Entrez Gene)
Chr38 XP_545733 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory