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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7401

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LHX6 HGNC:21735 (HGNC)
26468 (Entrez Gene)
608215 (OMIM)
LHX6 (MyGene.info)
HGNC homology
Chr9 q33.2 Chr9:122185626-122228893 (-)
GRCh38.p7
Q9UPM6 (UniProt | EBI)
NM_199160 (RefSeq)
mouse Lhx6 MGI:1306803 (MGI)
16874 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr2 24.17 cM Chr2:36081953-36105408 (-)
GRCm38
OTTMUSG00000012098 (VEGA)
OTTMUSP00000013031 (VEGA)
OTTMUST00000028787 (VEGA)
rat Lhx6 311901 (Entrez Gene)
Chr3 p11 NP_001101307 (RefSeq)
NM_001107837 (RefSeq)
chimpanzee LHX6 735560 (Entrez Gene)
Chr9 XP_003312314 (RefSeq)
cattle LHX6 541261 (Entrez Gene)
Chr11 NP_001179777 (RefSeq)
NM_001192848 (RefSeq)
dog LHX6 491354 (Entrez Gene)
Chr9 XP_003435390 (RefSeq)
chicken LHX6 772259 (Entrez Gene)
Chr17 XP_015135323 (RefSeq)
zebrafish lhx6 445565 (Entrez Gene)
Chr10 NP_001004015 (RefSeq)
NM_001004015 (RefSeq)
frog, western clawed lhx6 100493242 (Entrez Gene)
Chr8 XP_002941184 (RefSeq)
macaque, rhesus LHX6 698587 (Entrez Gene)
Chr15 XP_014972392 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/09/2018
MGI 6.12
The Jackson Laboratory