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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
73884

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC11A1 HGNC:10907 (HGNC)
6556 (Entrez Gene)
600266 (OMIM)
Chr2 q35 Chr2:218382029-218396894 (+)
GRCh38
Buruli Ulcer, Susceptibility to
Mycobacterium Tuberculosis, Susceptibility to
P49279 (UniProt | EBI)
NM_000578 (RefSeq)
mouse Slc11a1 MGI:1345275 (MGI)
18173 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 38.54 cM Chr1:74375195-74386062 (+)
GRCm38
OTTMUSG00000016632 (VEGA)
OTTMUSP00000017968 (VEGA)
OTTMUST00000040229 (VEGA)
rat Slc11a1 316519 (Entrez Gene)
Chr9 q33 P70553 (UniProt | EBI)
NM_001031658 (RefSeq)
chimpanzee SLC11A1 741434 (Entrez Gene)
Chr2B XP_001156701 (RefSeq)
rhesus macaque SLC11A1 701025 (Entrez Gene)
Chr12 XP_001089328 (RefSeq)
cattle SLC11A1 282470 (Entrez Gene)
Chr2 q43-q44 Q27981 (UniProt | EBI)
NM_174652 (RefSeq)
dog SLC11A1 478909 (Entrez Gene)
Chr37 Q9XT74 (UniProt | EBI)
NM_001013851 (RefSeq)
chicken SLC11A1 395811 (Entrez Gene)
Chr7 P51027 (UniProt | EBI)
NM_204964 (RefSeq)
western clawed frog slc11a1 100498626 (Entrez Gene)
ChrUN XP_002933999 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory