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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HOXA13 HGNC:5102 (HGNC)
3209 (Entrez Gene)
142959 (OMIM)
HOXA13 (MyGene.info)
HGNC homology
Chr7 p15.2 Chr7:27196880-27200106 (-)
hand-foot-genital syndrome
P31271 (UniProt | EBI)
NM_000522 (RefSeq)
mouse Hoxa13 MGI:96173 (MGI)
15398 (Entrez Gene)
Gene Tree
HGNC homology
Chr6 25.41 cM Chr6:52257694-52260803 (-)
hand-foot-genital syndrome
OTTMUSG00000026296 (VEGA)
OTTMUSP00000062790 (VEGA)
OTTMUST00000065048 (VEGA)
rat Hoxa13 500129 (Entrez Gene)
Chr4 q24 NP_001258284 (RefSeq)
NM_001271355 (RefSeq)
LOC102550333 102550333 (Entrez Gene)
chimpanzee HOXA13 472326 (Entrez Gene)
cattle HOXA13 787194 (Entrez Gene)
Chr4 XP_015325318 (RefSeq)
dog HOXA13 482375 (Entrez Gene)
Chr14 XP_539492 (RefSeq)
chicken HOX1J 100859244 (Entrez Gene)
HOXA13 373934 (Entrez Gene)
Chr2 Q90X25 (UniProt | EBI)
NM_204139 (RefSeq)
LOC100859005 100859005 (Entrez Gene)
zebrafish hoxa13b 30438 (Entrez Gene)
Chr16 P79724 (UniProt | EBI)
NM_131194 (RefSeq)
frog, western clawed hoxa13 100497053 (Entrez Gene)
Chr6 XP_002933431 (RefSeq)
macaque, rhesus HOXA13 704280 (Entrez Gene)
Chr3 XP_002803404 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory