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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
73882

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HOXA13 HGNC:5102 (HGNC)
3209 (Entrez Gene)
142959 (OMIM)
Chr7 p15.2 Chr7:27196880-27200106 (-)
GRCh38
Hand-Foot-Genital Syndrome; HFG
Preaxial Deficiency, Postaxial Polydactyly, and Hypospadias
P31271 (UniProt | EBI)
NM_000522 (RefSeq)
mouse Hoxa13 MGI:96173 (MGI)
15398 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 25.41 cM Chr6:52257694-52260803 (-)
GRCm38
Hand-Foot-Genital Syndrome; HFG
OTTMUSG00000026296 (VEGA)
OTTMUSP00000062790 (VEGA)
OTTMUST00000065048 (VEGA)
rat Hoxa13 500129 (Entrez Gene)
Chr4 q24 NP_001258284 (RefSeq)
NM_001271355 (RefSeq)
LOC102550333 102550333 (Entrez Gene)
Chr4 XP_006257773 (RefSeq)
chimpanzee HOXA13 472326 (Entrez Gene)
Chr7 XP_527701 (RefSeq)
rhesus macaque HOXA13 704280 (Entrez Gene)
Chr3 XP_002803404 (RefSeq)
cattle HOXA13 787194 (Entrez Gene)
Chr4 XP_001254666 (RefSeq)
dog HOXA13 482375 (Entrez Gene)
Chr14 XP_539492 (RefSeq)
chicken HOXA13 373934 (Entrez Gene)
Chr2 Q90X25 (UniProt | EBI)
NM_204139 (RefSeq)
LOC100859005 100859005 (Entrez Gene)
Chr2 XP_003640757 (RefSeq)
LOC100859244 100859244 (Entrez Gene)
Chr2 XP_003640766 (RefSeq)
western clawed frog hoxa13 100497053 (Entrez Gene)
ChrUN XP_002933431 (RefSeq)
zebrafish hoxa13b 30438 (Entrez Gene)
Chr16 P79724 (UniProt | EBI)
NM_131194 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory