About   Help   FAQ
Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
73874

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
select all deselect all Go
human COL1A1 HGNC:2197 (HGNC)
1277 (Entrez Gene)
120150 (OMIM)
Chr17 q21.33 Chr17:50184096-50201642 (-)
GRCh38
Caffey Disease
Collagen, Type I, Alpha-1; COL1A1
Ehlers-Danlos Syndrome, Type I
Ehlers-Danlos Syndrome, Type VII, Autosomal Dominant
Osteogenesis Imperfecta, Type I
Osteogenesis Imperfecta, Type II
Osteogenesis Imperfecta, Type III
Osteogenesis Imperfecta, Type IV
Osteoporosis
P02452 (UniProt | EBI)
NM_000088 (RefSeq)
mouse Col1a1 MGI:88467 (MGI)
12842 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 59.01 cM Chr11:94936224-94953042 (+)
GRCm38
Glioma Susceptibility 2; GLM2
Liebenberg Syndrome; LBNBG
Osteogenesis Imperfecta, Type I
Osteogenesis Imperfecta, Type II
Osteogenesis Imperfecta, Type III
OTTMUSG00000002059 (VEGA)
OTTMUSP00000002001 (VEGA)
OTTMUST00000004184 (VEGA)
rat Col1a1 29393 (Entrez Gene)
Chr10 q31 P02454 (UniProt | EBI)
NM_053304 (RefSeq)
rhesus macaque COL1A1 574201 (Entrez Gene)
Chr16 XP_001096194 (RefSeq)
cattle COL1A1 282187 (Entrez Gene)
Chr19 P02453 (UniProt | EBI)
NM_001034039 (RefSeq)
dog COL1A1 403651 (Entrez Gene)
Chr9 Q9XSJ7 (UniProt | EBI)
NM_001003090 (RefSeq)
western clawed frog LOC496414 496414 (Entrez Gene)
ChrUN NP_001011005 (RefSeq)
NM_001011005 (RefSeq)
zebrafish col1a1a 337158 (Entrez Gene)
Chr3 NP_954684 (RefSeq)
NM_199214 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/19/2014
MGI 5.19
The Jackson Laboratory