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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
73463

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATP2C2 HGNC:29103 (HGNC)
9914 (Entrez Gene)
613082 (OMIM)
Chr16 q24.1 Chr16:84368523-84464187 (+)
GRCh38
O75185 (UniProt | EBI)
NM_014861 (RefSeq)
mouse Atp2c2 MGI:1916297 (MGI)
69047 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 68.21 cM Chr8:119700009-119757718 (+)
GRCm38
ENSMUSG00000034112 (Ensembl Gene Model)
ENSMUSP00000092794 (Ensembl)
ENSMUST00000095171 (Ensembl)
rat Atp2c2 171496 (Entrez Gene)
Chr19 Q8R4C1 (UniProt | EBI)
NM_134462 (RefSeq)
chimpanzee ATP2C2 454282 (Entrez Gene)
Chr16 XP_511142 (RefSeq)
rhesus macaque ATP2C2 715279 (Entrez Gene)
Chr20 XP_001112571 (RefSeq)
cattle ATP2C2 510329 (Entrez Gene)
Chr18 XP_587457 (RefSeq)
dog ATP2C2 479626 (Entrez Gene)
Chr5 XP_536762 (RefSeq)
chicken ATP2C2 100859316 (Entrez Gene)
Chr11 XP_003641977 (RefSeq)
western clawed frog atp2c2 779979 (Entrez Gene)
ChrUN NP_001072524 (RefSeq)
NM_001079056 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory