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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
73

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL7A1 HGNC:2214 (HGNC)
1294 (Entrez Gene)
120120 (OMIM)
Chr3 p21.1 Chr3:48564073-48595160 (-)
GRCh38
Epidermolysis Bullosa Dystrophica, Autosomal Dominant; DDEB
Epidermolysis Bullosa Dystrophica, Autosomal Recessive; RDEB
Epidermolysis Bullosa Dystrophica, Pretibial
Epidermolysis Bullosa Pruriginosa
Epidermolysis Bullosa with Congenital Localized Absence of Skin and Deformity of Nails
Nail Disorder, Nonsyndromic Congenital, 8; NDNC8
Transient Bullous Dermolysis of the Newborn; TBDN
Q02388 (UniProt | EBI)
NM_000094 (RefSeq)
mouse Col7a1 MGI:88462 (MGI)
12836 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 59.63 cM Chr9:108953586-108984875 (+)
GRCm38
Epidermolysis Bullosa Dystrophica, Autosomal Recessive; RDEB
OTTMUSG00000021336 (VEGA)
OTTMUSP00000023639 (VEGA)
OTTMUST00000050581 (VEGA)
rat Col7a1 301012 (Entrez Gene)
Chr8 q32 NP_001100328 (RefSeq)
NM_001106858 (RefSeq)
chimpanzee COL7A1 101056895 (Entrez Gene)
Chr3 XP_003950149 (RefSeq)
cattle COL7A1 507133 (Entrez Gene)
Chr22 XP_002697097 (RefSeq)
dog COL7A1 403467 (Entrez Gene)
Chr20 NP_001002980 (RefSeq)
NM_001002980 (RefSeq)
chicken COL7A1 427584 (Entrez Gene)
Chr12 XP_425157 (RefSeq)
western clawed frog col7a1 100489404 (Entrez Gene)
ChrUN XP_002933125 (RefSeq)
zebrafish col7a1 100332562 (Entrez Gene)
Chr6 XP_009300870 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory