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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL7A1 HGNC:2214 (HGNC)
1294 (Entrez Gene)
120120 (OMIM)
HGNC homology
Chr3 p21.31 Chr3:48564073-48595302 (-)
autosomal dominant dystrophic epidermolysis bullosa
nonsyndromic congenital nail disorder 8
recessive dystrophic epidermolysis bullosa
Q02388 (UniProt | EBI)
NM_000094 (RefSeq)
mouse Col7a1 MGI:88462 (MGI)
12836 (Entrez Gene)
Gene Tree
HGNC homology
Chr9 59.63 cM Chr9:108953586-108984875 (+)
recessive dystrophic epidermolysis bullosa
OTTMUSG00000021336 (VEGA)
OTTMUSP00000023639 (VEGA)
OTTMUST00000050581 (VEGA)
rat Col7a1 301012 (Entrez Gene)
Chr8 q32 NP_001100328 (RefSeq)
NM_001106858 (RefSeq)
chimpanzee COL7A1 101056895 (Entrez Gene)
cattle COL7A1 507133 (Entrez Gene)
Chr22 XP_002697097 (RefSeq)
dog COL7A1 403467 (Entrez Gene)
Chr20 NP_001002980 (RefSeq)
NM_001002980 (RefSeq)
chicken COL7A1 427584 (Entrez Gene)
Chr12 XP_015148862 (RefSeq)
zebrafish col7a1 100332562 (Entrez Gene)
Chr6 XP_021332903 (RefSeq)
frog, western clawed col7a1 100489404 (Entrez Gene)
Chr4 XP_012817132 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory