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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CNTN1 HGNC:2171 (HGNC)
1272 (Entrez Gene)
600016 (OMIM)
CNTN1 (MyGene.info)
HGNC homology
Chr12 q12 Chr12:40692439-41072412 (+)
Compton-North congenital myopathy
Q12860 (UniProt | EBI)
NM_001256064 (RefSeq)
mouse Cntn1 MGI:105980 (MGI)
12805 (Entrez Gene)
Gene Tree
HGNC homology
Chr15 46.39 cM Chr15:92051165-92341953 (+)
Compton-North congenital myopathy
OTTMUSG00000014988 (VEGA)
OTTMUSP00000015953 (VEGA)
OTTMUST00000035588 (VEGA)
rat Cntn1 117258 (Entrez Gene)
Chr7 q35 Q63198 (UniProt | EBI)
NM_057118 (RefSeq)
chimpanzee CNTN1 451836 (Entrez Gene)
Chr12 XP_009423865 (RefSeq)
cattle CNTN1 281705 (Entrez Gene)
Chr5 Q28106 (UniProt | EBI)
NM_174280 (RefSeq)
dog CNTN1 477641 (Entrez Gene)
Chr27 XP_005637032 (RefSeq)
chicken CNTN1 417786 (Entrez Gene)
Chr1 P14781 (UniProt | EBI)
NM_001004381 (RefSeq)
zebrafish cntn1a 353150 (Entrez Gene)
Chr25 Q8AXZ4 (UniProt | EBI)
NM_180969 (RefSeq)
frog, western clawed cntn1 100487602 (Entrez Gene)
Chr3 XP_002932857 (RefSeq)
macaque, rhesus CNTN1 574365 (Entrez Gene)
Chr11 NP_001248680 (RefSeq)
NM_001261751 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory