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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7274

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CNTN1 HGNC:2171 (HGNC)
1272 (Entrez Gene)
600016 (OMIM)
Chr12 q11-q12 Chr12:40692442-41072412 (+)
GRCh38
Myopathy, Congenital, Compton-North; MYPCN
Q12860 (UniProt | EBI)
NM_001843 (RefSeq)
mouse Cntn1 MGI:105980 (MGI)
12805 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 46.39 cM Chr15:92051165-92341953 (+)
GRCm38
OTTMUSG00000014988 (VEGA)
OTTMUSP00000015954 (VEGA)
OTTMUST00000035589 (VEGA)
rat Cntn1 117258 (Entrez Gene)
Chr7 q35 Q63198 (UniProt | EBI)
NM_057118 (RefSeq)
chimpanzee CNTN1 451836 (Entrez Gene)
Chr12 XP_001168046 (RefSeq)
rhesus macaque CNTN1 574365 (Entrez Gene)
Chr11 NP_001248680 (RefSeq)
NM_001261751 (RefSeq)
cattle CNTN1 281705 (Entrez Gene)
Chr5 Q28106 (UniProt | EBI)
NM_174280 (RefSeq)
dog CNTN1 477641 (Entrez Gene)
Chr27 XP_851830 (RefSeq)
chicken CNTN1 417786 (Entrez Gene)
Chr1 P14781 (UniProt | EBI)
NM_001004381 (RefSeq)
zebrafish cntn1a 353150 (Entrez Gene)
Chr25 Q8AXZ4 (UniProt | EBI)
NM_180969 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory