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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VSX2 HGNC:1975 (HGNC)
338917 (Entrez Gene)
142993 (OMIM)
VSX2 (MyGene.info)
HGNC homology
Chr14 q24.3 Chr14:74239472-74262738 (+)
P58304 (UniProt | EBI)
NM_182894 (RefSeq)
mouse Vsx2 MGI:88401 (MGI)
12677 (Entrez Gene)
Gene Tree
HGNC homology
Chr12 39.28 cM Chr12:84569762-84595457 (+)
OTTMUSG00000038498 (VEGA)
OTTMUSP00000055786 (VEGA)
OTTMUST00000099372 (VEGA)
rat Vsx2 171360 (Entrez Gene)
Chr6 q31 NP_001162599 (RefSeq)
NM_001169128 (RefSeq)
chimpanzee VSX2 741059 (Entrez Gene)
Chr14 XP_024204571 (RefSeq)
cattle VSX2 528647 (Entrez Gene)
Chr10 NP_001180179 (RefSeq)
NM_001193250 (RefSeq)
dog VSX2 490780 (Entrez Gene)
Chr8 XP_013971534 (RefSeq)
chicken VSX2 395536 (Entrez Gene)
Chr5 Q9IAL1 (UniProt | EBI)
NM_204768 (RefSeq)
zebrafish vsx2 796163 (Entrez Gene)
Chr17 O42477 (UniProt | EBI)
NM_131462 (RefSeq)
frog, western clawed vsx2 100493176 (Entrez Gene)
Chr8 XP_002938642 (RefSeq)
macaque, rhesus VSX2 699261 (Entrez Gene)
Chr7 XP_014999585 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory