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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7266

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VSX2 HGNC:1975 (HGNC)
338917 (Entrez Gene)
142993 (OMIM)
Chr14 q24.3 Chr14:74239472-74262738 (+)
GRCh38
Microphthalmia, Isolated 2; MCOP2
Microphthalmia, Isolated, with Coloboma 3; MCOPCB3
P58304 (UniProt | EBI)
NM_182894 (RefSeq)
mouse Vsx2 MGI:88401 (MGI)
12677 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 39.28 cM Chr12:84569762-84595457 (+)
GRCm38
OTTMUSG00000038498 (VEGA)
OTTMUSP00000055786 (VEGA)
OTTMUST00000099372 (VEGA)
rat Vsx2 171360 (Entrez Gene)
Chr6 q31 NP_001162599 (RefSeq)
NM_001169128 (RefSeq)
chimpanzee VSX2 741059 (Entrez Gene)
Chr14 XP_001156350 (RefSeq)
rhesus macaque VSX2 699261 (Entrez Gene)
Chr7 XP_001093608 (RefSeq)
cattle VSX2 528647 (Entrez Gene)
Chr10 NP_001180179 (RefSeq)
NM_001193250 (RefSeq)
dog VSX2 490780 (Entrez Gene)
Chr8 XP_547902 (RefSeq)
chicken VSX2 395536 (Entrez Gene)
Chr5 Q9IAL1 (UniProt | EBI)
NM_204768 (RefSeq)
western clawed frog vsx2 100493176 (Entrez Gene)
ChrUN XP_002938642 (RefSeq)
zebrafish vsx2 796163 (Entrez Gene)
Chr17 O42477 (UniProt | EBI)
NM_131462 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory