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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7255

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CAV3 HGNC:1529 (HGNC)
859 (Entrez Gene)
601253 (OMIM)
Chr3 p25 Chr3:8733800-8746765 (+)
GRCh38
Cardiomyopathy, Familial Hypertrophic, 1; CMH1
Creatine Phosphokinase, Elevated Serum
Long QT Syndrome 9; LQT9
Muscular Dystrophy, Limb-Girdle, Type 1C; LGMD1C
Myopathy, Distal, Tateyama Type; MPDT
Rippling Muscle Disease; RMD
P56539 (UniProt | EBI)
NM_001234 (RefSeq)
mouse Cav3 MGI:107570 (MGI)
12391 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 52.26 cM Chr6:112459505-112472872 (+)
GRCm38
Muscular Dystrophy, Limb-Girdle, Type 1C; LGMD1C
12391 (NCBI Gene Model)
P51637 (UniProt | EBI)
NM_007617 (RefSeq)
rat Cav3 29161 (Entrez Gene)
Chr4 q42 P51638 (UniProt | EBI)
NM_019155 (RefSeq)
chimpanzee CAV3 738786 (Entrez Gene)
Chr3 XP_001144093 (RefSeq)
rhesus macaque CAV3 702163 (Entrez Gene)
Chr2 NP_001181007 (RefSeq)
NM_001194078 (RefSeq)
cattle CAV3 615310 (Entrez Gene)
Chr22 Q2KI43 (UniProt | EBI)
NM_001046558 (RefSeq)
dog CAV3 484671 (Entrez Gene)
Chr20 NP_001274002 (RefSeq)
NM_001287073 (RefSeq)
chicken CAV3 378796 (Entrez Gene)
Chr12 NP_989701 (RefSeq)
NM_204370 (RefSeq)
western clawed frog cav3.1 100125124 (Entrez Gene)
ChrUN NP_001096498 (RefSeq)
NM_001103028 (RefSeq)
zebrafish cav3 449679 (Entrez Gene)
Chr6 NP_991301 (RefSeq)
NM_205738 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory