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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
72341

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human OPN5 HGNC:19992 (HGNC)
221391 (Entrez Gene)
609042 (OMIM)
OPN5 (MyGene.info)
HGNC homology
Chr6 p12.3 Chr6:47782037-47831088 (+)
GRCh38.p7
Q6U736 (UniProt | EBI)
NM_181744 (RefSeq)
mouse Opn5 MGI:2662912 (MGI)
353344 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr17 19.65 cM Chr17:42556783-42611313 (-)
GRCm38
ENSMUSG00000043972 (Ensembl Gene Model)
ENSMUSP00000063542 (Ensembl)
ENSMUST00000068355 (Ensembl)
rat Opn5 316259 (Entrez Gene)
Chr9 q13 NP_861437 (RefSeq)
NM_181772 (RefSeq)
chimpanzee OPN5 739707 (Entrez Gene)
Chr6 XP_016811141 (RefSeq)
cattle OPN5 541280 (Entrez Gene)
Chr23 NP_001193009 (RefSeq)
NM_001206080 (RefSeq)
dog OPN5 100856777 (Entrez Gene)
Chr12 XP_003639476 (RefSeq)
chicken OPN5 428670 (Entrez Gene)
Chr3 NP_001124215 (RefSeq)
NM_001130743 (RefSeq)
zebrafish opn5 564181 (Entrez Gene)
Chr20 NP_001186975 (RefSeq)
NM_001200046 (RefSeq)
frog, western clawed opn5 100497642 (Entrez Gene)
Chr5 XP_002936036 (RefSeq)
macaque, rhesus OPN5 705586 (Entrez Gene)
Chr4 XP_001104044 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/14/2017
MGI 6.11
The Jackson Laboratory