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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
7221

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TARDBP HGNC:11571 (HGNC)
23435 (Entrez Gene)
605078 (OMIM)
Chr1 p36.22 Chr1:11012622-11025492 (+)
GRCh38
Amyotrophic Lateral Sclerosis 10, with or without Frontotemporal Dementia;
Q13148 (UniProt | EBI)
NM_007375 (RefSeq)
mouse Tardbp MGI:2387629 (MGI)
230908 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 78.77 cM Chr4:148612382-148627019 (-)
GRCm38
Amyotrophic Lateral Sclerosis 1; ALS1
OTTMUSG00000010947 (VEGA)
OTTMUSP00000011770 (VEGA)
OTTMUST00000025673 (VEGA)
chimpanzee TARDBP 457942 (Entrez Gene)
Chr1 XP_514380 (RefSeq)
rhesus macaque TARDBP 713860 (Entrez Gene)
Chr1 XP_001102660 (RefSeq)
cattle TARDBP 540632 (Entrez Gene)
Chr16 NP_001039950 (RefSeq)
NM_001046485 (RefSeq)
dog TARDBP 478234 (Entrez Gene)
Chr2 XP_005618063 (RefSeq)
chicken TARDBP 419453 (Entrez Gene)
Chr21 Q5ZLN5 (UniProt | EBI)
NM_001030878 (RefSeq)
western clawed frog tardbp 394651 (Entrez Gene)
ChrUN Q28F51 (UniProt | EBI)
NM_001244758 (RefSeq)
zebrafish tardbp 325052 (Entrez Gene)
Chr6 NP_958884 (RefSeq)
NM_201476 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory