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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
72199

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PATJ HGNC:28881 (HGNC)
10207 (Entrez Gene)
603199 (OMIM)
INADL (MyGene.info)
HGNC homology
Chr1 p31.3 Chr1:61742477-62163920 (+)
GRCh38.p7
Q8NI35 (UniProt | EBI)
NM_005799 (RefSeq)
mouse Patj MGI:1277960 (MGI)
12695 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr4 45.6 cM Chr4:98395785-98719603 (+)
GRCm38
ENSMUSG00000061859 (Ensembl Gene Model)
ENSMUSP00000049176 (Ensembl)
ENSMUST00000041284 (Ensembl)
rat Patj 140581 (Entrez Gene)
Chr5 q33 NP_536323 (RefSeq)
NM_080398 (RefSeq)
chimpanzee PATJ 456900 (Entrez Gene)
Chr1 XP_009457378 (RefSeq)
cattle PATJ 536993 (Entrez Gene)
Chr3 NP_001178430 (RefSeq)
NM_001191501 (RefSeq)
dog PATJ 479550 (Entrez Gene)
Chr5 XP_013969204 (RefSeq)
chicken PATJ 424682 (Entrez Gene)
Chr8 XP_025009036 (RefSeq)
zebrafish patj 368723 (Entrez Gene)
Chr22 NP_001120657 (RefSeq)
NM_001127185 (RefSeq)
frog, western clawed patj 100036704 (Entrez Gene)
Chr4 XP_017949050 (RefSeq)
macaque, rhesus INADL 694408 (Entrez Gene)
Chr1
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/16/2019
MGI 6.13
The Jackson Laboratory