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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
72101

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL23A1 HGNC:22990 (HGNC)
91522 (Entrez Gene)
610043 (OMIM)
HGNC homology
Chr5 q35.3 Chr5:178237616-178590555 (-)
GRCh38.p7
Q86Y22 (UniProt | EBI)
NM_173465 (RefSeq)
mouse Col23a1 MGI:2653243 (MGI)
237759 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 31.03 cM Chr11:51289920-51583918 (+)
GRCm38
ENSMUSG00000063564 (Ensembl Gene Model)
ENSMUSP00000099826 (Ensembl)
ENSMUST00000102765 (Ensembl)
rat Col23a1 353303 (Entrez Gene)
Chr10 q21 Q810Y4 (UniProt | EBI)
NM_181636 (RefSeq)
chimpanzee COL23A1 462321 (Entrez Gene)
Chr5 XP_024212616 (RefSeq)
cattle COL23A1 613347 (Entrez Gene)
Chr7 XP_002689082 (RefSeq)
dog COL23A1 607556 (Entrez Gene)
Chr11 XP_022280824 (RefSeq)
chicken COL23A1 425481 (Entrez Gene)
Chr13 XP_003642131 (RefSeq)
zebrafish LOC101886266 101886266 (Entrez Gene)
Chr21 XP_005161456 (RefSeq)
si:dkeyp-44a8.4 567373 (Entrez Gene)
Chr14 XP_695758 (RefSeq)
macaque, rhesus COL23A1 709456 (Entrez Gene)
Chr6 XP_014997083 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory