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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
71803

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human OTOA HGNC:16378 (HGNC)
146183 (Entrez Gene)
607038 (OMIM)
Chr16 p12.2 Chr16:21678514-21760729 (+)
GRCh38
Deafness, Autosomal Recessive 22; DFNB22
Q7RTW8 (UniProt | EBI)
NM_144672 (RefSeq)
mouse Otoa MGI:2149209 (MGI)
246190 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 65.07 cM Chr7:121083322-121163097 (+)
GRCm38
Deafness, Autosomal Recessive 22; DFNB22
OTTMUSG00000036710 (VEGA)
OTTMUSP00000052245 (VEGA)
OTTMUST00000094051 (VEGA)
rat Otoa 499260 (Entrez Gene)
Chr1 q36 XP_006223557 (RefSeq)
chimpanzee OTOA 745342 (Entrez Gene)
Chr16 XP_003315054 (RefSeq)
rhesus macaque OTOA 699600 (Entrez Gene)
Chr20 XP_002802471 (RefSeq)
cattle LOC617718 617718 (Entrez Gene)
Chr25 XP_875121 (RefSeq)
dog OTOA 608655 (Entrez Gene)
Chr6 XP_850839 (RefSeq)
chicken OTOA 416624 (Entrez Gene)
Chr14 XP_001234949 (RefSeq)
NM_001006173 (RefSeq)
western clawed frog otoa 100490578 (Entrez Gene)
ChrUN XP_002932026 (RefSeq)
zebrafish si:dkey-71b5.7 100007015 (Entrez Gene)
Chr16 XP_009290555 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory