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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
71541

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PAPLN HGNC:19262 (HGNC)
89932 (Entrez Gene)
PAPLN (MyGene.info)
HGNC homology
Chr14 q24.2 Chr14:73235842-73274640 (+)
GRCh38.p7
O95428 (UniProt | EBI)
NM_173462 (RefSeq)
mouse Papln MGI:2386139 (MGI)
170721 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr12 38.87 cM Chr12:83763634-83792382 (+)
GRCm38
OTTMUSG00000027564 (VEGA)
OTTMUSP00000034464 (VEGA)
OTTMUST00000068258 (VEGA)
rat Papln 314297 (Entrez Gene)
Chr6 q24 XP_006225903 (RefSeq)
NM_001108039 (RefSeq)
chimpanzee PAPLN 739796 (Entrez Gene)
Chr14 XP_016781841 (RefSeq)
dog PAPLN 490769 (Entrez Gene)
Chr8 XP_005623979 (RefSeq)
chicken PAPLN 428873 (Entrez Gene)
Chr5 XP_004941722 (RefSeq)
zebrafish paplna 562930 (Entrez Gene)
Chr17 XP_001919035 (RefSeq)
frog, western clawed papln 100489537 (Entrez Gene)
Chr8 XP_002941130 (RefSeq)
macaque, rhesus PAPLN 696394 (Entrez Gene)
Chr7 XP_014999534 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/12/2017
MGI 6.10
The Jackson Laboratory